04e05c302dc601de573a0367a2082f81 *DESCRIPTION
da12c5010f0f0daced416512bb6d4aa6 *NAMESPACE
116a5c63a386dd2cc4a36a749d666d64 *R/zroutines.R
587776fe7648e3513f23989408cc3579 *README.md
23d5bc5f564ed8481228ac5c60810d6c *configure
0c7eac5426be0a46be8ea26c167c7467 *configure.ac
be2c5e8e0c3ecfb2e704ae7782f53fc8 *man/add.broad.peak.regions.Rd
4e831652f8327f701ceeb9e5877acded *man/densum.Rd
180f2ad88f4afb2dbe5b9423158bf609 *man/find.binding.positions.Rd
c0310d39b0eae4edc6af6dc1581c6b12 *man/get.binding.characteristics.Rd
ec053c69d5fa2610b5469aee503f11ff *man/get.broad.enrichment.clusters.Rd
120769400978a543a5330adb4c1aad8f *man/get.conservative.fold.enrichment.profile.Rd
ca2da068879340379a05b404d73e9132 *man/get.conservative.fold.enrichment.profile2.Rd
3cdf7854ca636eb095af451f212829d1 *man/get.mser.Rd
c85e1e627f6fd2668ed6eae6b8679a1b *man/get.mser.interpolation.Rd
fe7fa4c525f2fc0422f0fa3e7fa1a824 *man/get.smoothed.enrichment.mle.Rd
0faded7b3cd93d37e85ae76322d753e9 *man/get.smoothed.enrichment.mle2.Rd
f36594e834f536f09b767856c2d5f347 *man/get.smoothed.tag.density.Rd
d0ef6fa196b7482412869ec7cfdc7980 *man/output.binding.results.Rd
166ab0cb2c125a13b4a75ec4de30a7d8 *man/points_within.Rd
b21d19476c2291b3a0b320841f25456f *man/read.arachne.tags.Rd
a714eaeb0cc803ad9fc6caff0c92f2cf *man/read.bam.tags.Rd
19ea9eb29a5ec1d3c307ef53f0c28276 *man/read.bin.maqmap.tags.Rd
21878f5fb0fd4a22b741728c60b1b2ea *man/read.bowtie.tags.Rd
be89aa4c7f4bc07a7109ba9d5ca0ebbb *man/read.eland.tags.Rd
c39962f0f6f4c619e1403c30545ec71f *man/read.helicos.tags.Rd
57910f9620caa82960ba92fa17597e6a *man/read.maqmap.tags.Rd
2e3d76a6a7b28adff8ce716d4801d41c *man/read.meland.tags.Rd
d8c0a935295b883c7cd73ecc101631bf *man/read.short.arachne.tags.Rd
0babfb2b1e9833f1341accbffea1988b *man/read.tagalign.tags.Rd
b640b6584e4d5f47c83173e1b23640c6 *man/remove.local.tag.anomalies.Rd
46a10b9b5e8019a41d72bfac5eac87a8 *man/select.informative.tags.Rd
db41435b342984f3bfe76b8afb858a91 *man/spp-package.Rd
d2b6c4a83c612aa2e73cfcd7c270e210 *man/write.broadpeak.info.Rd
718b280ad26d9575ba799a33df19828a *man/write.narrowpeak.binding.Rd
359ddcdb6181b853df7eb754bcec13b5 *man/writewig.Rd
3d9bac31e0bb6590ce8544003d52cf0a *src/Makevars.in
7563d9a17bfae0f4bb648d859da1e50f *src/api_global.h
de1e654f079c85b8e00c3fb953c07420 *src/bed2vector.cpp
0d2294ac5a53bca2b3a538a3e9fbe6be *src/cdensum.c
edff4c928e491daba8a54d5054a04090 *src/const.h
6ccf2ac5b9712bf69d59422ffb51ef06 *src/maqmap.c
c9a8a87c72a0c995a34b633c78a67de5 *src/maqmap.h
dd8bc59bde265c8cdf9e907c33a6fff4 *src/maqread.cpp
08bf369a220a2bf9e67ca4867c670638 *src/pc.h
88a5c7aeab4c28e3ab88281a5344ced4 *src/peaks.cpp
2ee25121f93953359214c30b75c3fbc9 *src/spp_init.c
1aa7d7f195d15ed9d58329d5843eda4d *src/wdl.cpp
