Index of /pub/FreeBSD/branches/ports/biology

• Parent Directory
• Makefile
• R-cran-Biobase/
• R-cran-BiocGenerics/
• R-cran-BiocManager/
• abyss/
• ad2vcf/
• artemis/
• atac-seq/
• augustus/
• avida/
• babel/
• bamtools/
• bamutil/
• barrnap/
• bbmap/
• bcf-score/
• bcftools/
• bedtools/
• bfc/
• bifrost/
• bio-mocha/
• bioawk/
• biococoa/
• biolibc-tools/
• biolibc/
• bioparser/
• biosig/
• biosoup/
• biostar-tools/
• bolt-lmm/
• bowtie/
• bowtie2/
• btllib/
• bwa/
• canu/
• cd-hit/
• cdbfasta/
• checkm/
• chip-seq/
• clustal-omega/
• clustalw/
• cufflinks/
• cytoscape/
• ddocent/
• diamond/
• dsr-pdb/
• edlib/
• emboss/
• erminej/
• exonerate/
• fasda/
• fasta/
• fasta3/
• fastahack/
• fastdnaml/
• fastool/
• fastp/
• fastq-trim/
• fastqc/
• fasttree/
• fastx-toolkit/
• figtree/
• flash/
• fluctuate/
• freebayes/
• garlic/
• gatk/
• gcta/
• gemma/
• generand/
• gff2ps/
• gffread/
• gmap/
• gperiodic/
• graphlan/
• groopm/
• haplohseq/
• hhsuite/
• hisat2/
• hmmer/
• htslib/
• hyphy/
• igv/
• infernal/
• iolib/
• iqtree/
• jalview/
• jellyfish/
• kallisto/
• kmcp/
• lamarc/
• libbigwig/
• libcombine/
• libgff/
• libgtextutils/
• libneurosim/
• libnuml/
• libsbml/
• libsedml/
• linux-foldingathome/
• locarna/
• mafft/
• mapm3/
• mashmap/
• megahit/
• metaeuk/
• migrate/
• minimap2/
• mmseqs2/
• molden/
• mothur/
• mrbayes/
• mummer/
• muscle/
• ncbi-blast+/
• ncbi-cxx-toolkit/
• ncbi-entrez-direct/
• ncbi-toolkit/
• ncbi-vdb/
• ngs-sdk/
• p5-AcePerl/
• p5-Bio-ASN1-EntrezGene/
• p5-Bio-Cluster/
• p5-Bio-Coordinate/
• p5-Bio-DB-EMBL/
• p5-Bio-DB-NCBIHelper/
• p5-Bio-Das-Lite/
• p5-Bio-Das/
• p5-Bio-FeatureIO/
• p5-Bio-GFF3/
• p5-Bio-Glite/
• p5-Bio-Graphics/
• p5-Bio-MAGETAB/
• p5-Bio-NEXUS/
• p5-Bio-Phylo/
• p5-Bio-SCF/
• p5-Bio-Variation/
• p5-BioPerl-Run/
• p5-BioPerl/
• p5-TrimGalore/
• p5-transdecoder/
• paml/
• pbbam/
• peak-classifier/
• pear-merger/
• phrap/
• phred/
• phyml/
• picard-tools/
• plink/
• pooler/
• primer3/
• prodigal/
• prodigy-lig/
• protomol/
• psi88/
• py-Genesis-PyAPI/
• py-PySCeS/
• py-bcbio-gff/
• py-biom-format/
• py-biopython/
• py-biosig/
• py-bx-python/
• py-crossmap/
• py-cutadapt/
• py-deeptools/
• py-deeptoolsintervals/
• py-dna-features-viewer/
• py-dnaio/
• py-ete3/
• py-gffutils/
• py-goatools/
• py-gtfparse/
• py-hits/
• py-htseq/
• py-libnuml/
• py-libsedml/
• py-loompy/
• py-macs2/
• py-macs3/
• py-mrcfile/
• py-multiqc/
• py-newick/
• py-ont-fast5-api/
• py-orange3-bioinformatics/
• py-orange3-single-cell/
• py-pandas-charm/
• py-py2bit/
• py-pybigwig/
• py-pyfaidx/
• py-pyrodigal/
• py-pysam/
• py-python-libsbml/
• py-pywgsim/
• py-resdk/
• py-scikit-bio/
• py-valerius/
• py-xenaPython/
• pyfasta/
• python-nexus/
• rainbow/
• rampler/
• readseq/
• rna-seq/
• ruby-bio/
• rubygem-bio-executables/
• rubygem-bio-old-biofetch-emulator/
• rubygem-bio-shell/
• rubygem-bio/
• salmon/
• sam2pairwise/
• samtools/
• scrm/
• seaview/
• seqan-apps/
• seqan/
• seqan1/
• seqan3/
• seqkit/
• seqtk/
• seqwish/
• sigviewer/
• slclust/
• smithwaterman/
• snpeff/
• spoa/
• sra-tools/
• stacks/
• star/
• stringtie/
• subread/
• tRNAscan-SE/
• tabixpp/
• taxonkit/
• treekin/
• treepuzzle/
• trimadap/
• trimmomatic/
• ucsc-userapps/
• ugene/
• unikmer/
• vcf-split/
• vcf2hap/
• vcflib/
• vcftools/
• velvet/
• viennarna/
• vsearch/
• vt/
• wfa2-lib/
• wise/